BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D01SP1|AL426993
(367 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1624 439 e-123
>3x_Contig1624
Length = 12551
Score = 439 bits (220), Expect = e-123
Identities = 277/287 (96%), Gaps = 7/287 (2%)
Strand = Plus / Plus
Query: 1 tgttcgaatacgagtttgcggtaccctggggaagattattcgtcctgctattctgcagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10960 tgttcgaatacgagtttgcggtaccctggggaagattattcgtcctgctattctgcagtc 11019
Query: 61 ttgatttagcctgcctcaaaactttaccgaacgtagaattcagtagtattagtaacattg 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 11020 ttgatttagcctgcctcaaaactttaccgaacgtaga-ttcagtagtattagtaacattg 11078
Query: 121 tttaacactggtcttcttagcatgttcaagtttttcaagcttctatcatatttatccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11079 tttaacactggtcttcttagcatgttcaagtttttcaagcttctatcatatttatccttt 11138
Query: 181 gacataatgctttgacagaattgtctttbaatttagatttctgttaanatagaaagagat 240
|||||||||||||||||||||||||||| ||||||| |||||||||| | || |||||||
Sbjct: 11139 gacataatgctttgacagaattgtcttt-aatttag-tttctgttaaaa-ag-aagagat 11194
Query: 241 cggaaagakagacaaattgcgctttctttawgtacctgctttagcaa 287
|||||||| |||| |||||| ||||||||| ||||||||||||||||
Sbjct: 11195 cggaaagaaagac-aattgcactttcttta-gtacctgctttagcaa 11239
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2242
Number of Sequences: 1807
Number of extensions: 2242
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 367
length of database: 10,358,551
effective HSP length: 15
effective length of query: 352
effective length of database: 10,331,446
effective search space: 3636668992
effective search space used: 3636668992
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.3 bits)